finished shhh.seqs command, fixed bug with remove.groups and get.groups that caused...

[mothur.git] / heatmapsim.h

diff --git a/heatmapsim.h b/heatmapsim.h
index ffafb7d3f96ac5d72695371af4b3e850c3fc80ad..a28995df7edf1cfc234fcd0c22416164b3c6c347 100644 (file)
--- a/heatmapsim.h
+++ b/heatmapsim.h
@@ -12,7 +12,6 @@
 
 #include "sharedrabundvector.h"
 #include "datavector.hpp"
-#include "globaldata.hpp"
 #include "calculator.h"
 
 /***********************************************************************/
@@ -20,18 +19,18 @@
 class HeatMapSim {
        
        public:
-               HeatMapSim(string);
+               HeatMapSim(string, string);
                ~HeatMapSim(){};
        
-               void getPic(vector<SharedRAbundVector*>, vector<Calculator*>);
-               void getPic(vector< vector<double> >, vector<string>);
+               vector<string> getPic(vector<SharedRAbundVector*>, vector<Calculator*>);
+               string getPic(vector< vector<double> >, vector<string>);
 
        private:
                void printLegend(int, float);
 
-               GlobalData* globaldata;
-               string format, groupComb, outputDir;
+               string format, groupComb, outputDir, inputfile;
                ofstream outsvg;
+               MothurOut* m;
                        
 };