precluster command finished

[mothur.git] / heatmapsim.cpp

diff --git a/heatmapsim.cpp b/heatmapsim.cpp
index 33588e671ac16a36b175dcdfc0291dc25a19e72c..1544dc2396c558361a663045278d3757f75aeed6 100644 (file)
--- a/heatmapsim.cpp
+++ b/heatmapsim.cpp
@@ -21,17 +21,7 @@
 
 //**********************************************************************************************************************
 HeatMapSim::HeatMapSim(){
-       try {
                globaldata = GlobalData::getInstance();
-       }
-       catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the HeatMap class Function HeatMap. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the HeatMap class function HeatMap. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
 }
 //**********************************************************************************************************************
 
@@ -47,7 +37,7 @@ void HeatMapSim::getPic(vector<SharedRAbundVector*> lookup, vector<Calculator*>
                        openOutputFile(filenamesvg, outsvg);
                        
                        //svg image
-                       outsvg << "<svg width=\"100%\" height=\"100%\" viewBox=\"0 0 " + toString((lookup.size() * 150) + 160) + " " + toString((lookup.size() * 150) + 160)  + "\">\n";
+                       outsvg << "<svg xmlns:svg=\"http://www.w3.org/2000/svg\" xmlns=\"http://www.w3.org/2000/svg\" width=\"100%\" height=\"100%\" viewBox=\"0 0 " + toString((lookup.size() * 150) + 160) + " " + toString((lookup.size() * 150) + 160)  + "\">\n";
                        outsvg << "<g>\n";
                
                        //white backround
@@ -107,11 +97,7 @@ void HeatMapSim::getPic(vector<SharedRAbundVector*> lookup, vector<Calculator*>
                
        }
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the HeatMapSim class Function getPic. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       catch(...) {
-               cout << "An unknown error has occurred in the HeatMapSim class function getPic. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               errorOut(e, "HeatMapSim", "getPic");
                exit(1);
        }
 }
@@ -148,14 +134,9 @@ void HeatMapSim::printLegend(int y, float maxSim) {
        }
        
        catch(exception& e) {
-               cout << "Standard Error: " << e.what() << " has occurred in the HeatMapSim class Function printLegend. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
+               errorOut(e, "HeatMapSim", "printLegend");
                exit(1);
        }
-       catch(...) {
-               cout << "An unknown error has occurred in the HeatMapSim class function printLegend. Please contact Pat Schloss at pschloss@microbio.umass.edu." << "\n";
-               exit(1);
-       }
-       
 }
 
 //**********************************************************************************************************************