#include "command.hpp"
#include "inputdata.h"
-#include "readmatrix.hpp"
+#include "readotu.h"
#include "sharedlistvector.h"
-
+#include "heatmap.h"
+#include "rabundvector.hpp"
class GlobalData;
-
class HeatMapCommand : public Command {
public:
private:
GlobalData* globaldata;
- ReadMatrix* read;
+ ReadOTUFile* read;
InputData* input;
SharedListVector* SharedList;
- SharedOrderVector* order;
- OrderVector* ordersingle;
+ RAbundVector* rabund;
+ vector<SharedRAbundVector*> lookup;
+ HeatMap* heatmap;
string format;
};