#include "command.hpp"
#include "inputdata.h"
-#include "readmatrix.hpp"
+#include "readotu.h"
#include "sharedlistvector.h"
+#include "heatmap.h"
+#include "sharedutilities.h"
class GlobalData;
private:
GlobalData* globaldata;
- ReadMatrix* read;
+ ReadOTUFile* read;
+ SharedUtil* util;
InputData* input;
SharedListVector* SharedList;
SharedOrderVector* order;
OrderVector* ordersingle;
+ HeatMap* heatmap;
string format;
};