]> git.donarmstrong.com Git - mothur.git/blobdiff - heatmapcommand.h
added distance search method to classify.seqs
[mothur.git] / heatmapcommand.h
index 2ae9882db4ff0c5390293cdfd6ea0e2b2c496c11..83f6c0f21f4aefeb209056bdad3002e5449762be 100644 (file)
@@ -36,13 +36,10 @@ private:
        RAbundVector* rabund;
        vector<SharedRAbundVector*> lookup;
        HeatMap* heatmap;
-       OptionParser* parser;
-       map<string, string> parameters;
-       map<string, string>::iterator it;
+
        bool abort, allLines;
-       set<int> lines; //hold lines to be used
        set<string> labels; //holds labels to be used
-       string format, groups, sorted, scale, line, label;
+       string format, groups, sorted, scale, label, outputDir;
        vector<string> Groups;