*
*/
-using namespace std;
-
-#include "ordervector.hpp"
-#include "sabundvector.hpp"
-#include "sharedsabundvector.h"
-#include "sharedordervector.h"
+#include "rabundvector.hpp"
+#include "sharedrabundvector.h"
#include "datavector.hpp"
#include "globaldata.hpp"
class HeatMap {
public:
- HeatMap();
+ HeatMap(string, string, string);
~HeatMap(){};
- void getPic(OrderVector*);
- void getPic(SharedOrderVector*);
+ string getPic(RAbundVector*);
+ string getPic(vector<SharedRAbundVector*>);
private:
- void getSharedVectors(SharedOrderVector*);
- void setGroups();
-
- GlobalData* globaldata;
- vector<SharedSAbundVector> lookup;
- SAbundVector sabund;
- string format;
+ void sortSharedVectors(vector<SharedRAbundVector*>& );
+ void printLegend(int, float);
+ GlobalData* globaldata;
+ string format, sorted, groupComb, scaler, outputDir;
+ ofstream outsvg;
+ MothurOut* m;
};
+/***********************************************************************/
+
#endif
+
+
+