*
*/
-using namespace std;
-
-#include "ordervector.hpp"
#include "rabundvector.hpp"
#include "sharedrabundvector.h"
-#include "sharedordervector.h"
#include "datavector.hpp"
#include "globaldata.hpp"
-#include "sharedutilities.h"
/***********************************************************************/
class HeatMap {
public:
- HeatMap();
- ~HeatMap(){ delete util; };
+ HeatMap(string, string, string);
+ ~HeatMap(){};
- void getPic(OrderVector*);
- void getPic(SharedOrderVector*);
+ void getPic(RAbundVector*);
+ void getPic(vector<SharedRAbundVector*>);
private:
void sortSharedVectors(vector<SharedRAbundVector*>& );
void printLegend(int, float);
GlobalData* globaldata;
- SharedUtil* util;
- string format, sorted, groupComb, scaler;
+ string format, sorted, groupComb, scaler, outputDir;
ofstream outsvg;
};
+