changed groupfile in classify.seqs to reflect multiple fasta files

[mothur.git] / hclustercommand.h

diff --git a/hclustercommand.h b/hclustercommand.h
index 443d8709bb7dd9294841e2dfc24584569e78e7c0..1aae49d9b341a6ce2652ed4bd3e340bf2a0a9040 100644 (file)
--- a/hclustercommand.h
+++ b/hclustercommand.h
@@ -46,13 +46,14 @@ private:
        ListVector oldList;
        ReadCluster* read;
        
-       bool abort, sorted, print_start;
+       bool abort, sorted, print_start, hard;
        string method, fileroot, tag, distfile, format, phylipfile, columnfile, namefile, sort, showabund, timing, outputDir;
        double cutoff;
        int precision, length;
        ofstream sabundFile, rabundFile, listFile;
        time_t start;
        unsigned long loops;
+       vector<string> outputNames;
        
        void printData(string label);
 };