added citation function to commands

[mothur.git] / groupmap.h

diff --git a/groupmap.h b/groupmap.h
index 8a1cfff6f660e0042f8a44784e8abff7864c5c2e..54085a19bab041d0caf17981c8c6c81f05a0c8b9 100644 (file)
--- a/groupmap.h
+++ b/groupmap.h
@@ -21,6 +21,7 @@ public:
        GroupMap(string);
        ~GroupMap();
        int readMap();
+       int readDesignMap();
        int getNumGroups();
        bool isValidGroup(string);  //return true if string is a valid group
        string getGroup(string);
@@ -29,6 +30,7 @@ public:
        map<string, int> groupIndex;  //groupname, vectorIndex in namesOfGroups. - used by collectdisplays and libshuff commands.
        int getNumSeqs()  {  return groupmap.size();  }
        vector<string> getNamesSeqs();
+       vector<string> getNamesSeqs(vector<string>); //get names of seqs belonging to a group or set of groups
        int getNumSeqs(string); //return the number of seqs in a given group
                        
 private: