#ifndef GLOBALDATA_HPP
#define GLOBALDATA_HPP
-#include <string>
-#include <vector>
-#include <set>
-#include <iostream>
-#include <iomanip>
-#include <map>
-#include <sstream>
-#include <stdexcept>
-#include <exception>
-
+#include "mothur.h"
#include "groupmap.h"
#include "treemap.h"
string getFreq();
string getAbund();
string getRandomTree();
+ string getGroups();
void setListFile(string);
void setPhylipFile(string);
void setSabundFile(string);
void setFormat(string);
void setRandomTree(string);
+ void setGroups(string);
void setCalc(string);