added code to format fast files for uchime. started work on sff.multiple command

[mothur.git] / getsharedotucommand.h

diff --git a/getsharedotucommand.h b/getsharedotucommand.h
index d7ffef3c74b965967dd6f68d7a6914183ec2253f..e2026d71442b4a1c461ca1028c7dcd6fc4071986 100644 (file)
--- a/getsharedotucommand.h
+++ b/getsharedotucommand.h
@@ -28,9 +28,11 @@ class GetSharedOTUCommand : public Command {
                string getCommandName()                 { return "get.sharedseqs";                      }
                string getCommandCategory()             { return "OTU-Based Approaches";        }
                string getRequiredCommand()             { return "none";                                        }
-               string getHelpString(); 
+               string getOutputFileNameTag(string, string);
+       string getHelpString(); 
                string getCitation() { return "http://www.mothur.org/wiki/Get.sharedseqs"; }
-       
+               string getDescription()         { return "identifies sequences that are either unique or shared by specific groups"; }
+
                int execute(); 
                void help() { m->mothurOut(getHelpString()); }