changed hard parameter in cluster commands

[mothur.git] / getsharedotucommand.h

diff --git a/getsharedotucommand.h b/getsharedotucommand.h
index 6470961cdb204dac5992344ed3a5e91bd3ec797a..30a5cd2468ab7ec8bb741729f4cb390e8a8f7c1d 100644 (file)
--- a/getsharedotucommand.h
+++ b/getsharedotucommand.h
@@ -33,14 +33,15 @@ class GetSharedOTUCommand : public Command {
                GroupMap* groupMap;
                
                set<string> labels;
-               string fastafile, label, groups, listfile, groupfile, output;
-               bool abort, allLines;
+               string fastafile, label, groups, listfile, groupfile, output, userGroups, outputDir;
+               bool abort, allLines, unique;
                vector<string> Groups;
                map<string, string> groupFinder;
                map<string, string>::iterator it;
                vector<Sequence> seqs;
+               vector<string> outputNames;
                
-               void process(ListVector*);
+               int process(ListVector*);
                
 };
 //**********************************************************************************************************************