string getCommandCategory() { return "OTU-Based Approaches"; }
string getHelpString();
string getCitation() { return "http://www.mothur.org/wiki/Get.oturep"; }
+ string getDescription() { return "gets a representative sequence for each OTU"; }
+
int execute();
void help() { m->mothurOut(getHelpString()); }
SeqMap getMap(int);
string findRep(vector<string>); // returns the name of the "representative" sequence of given bin or subset of a bin, for groups
int processNames(string, string);
+ int processFastaNames(string, string);
};
#endif