added headers to shared and relabund files

[mothur.git] / getlistcountcommand.cpp

diff --git a/getlistcountcommand.cpp b/getlistcountcommand.cpp
index 404d35379730d3e3859a87654e795739f3f9b5cf..4dc20634c1e53d774348559447c736f736ff4e69 100644 (file)
--- a/getlistcountcommand.cpp
+++ b/getlistcountcommand.cpp
@@ -40,7 +40,7 @@ string GetListCountCommand::getHelpString(){
                helpString += "Example get.otulist(list=amazon.fn.list, label=0.10).\n";
                helpString += "The default value for label is all lines in your inputfile.\n";
                helpString += "The get.otulist command outputs a .otu file for each distance you specify listing the bin number and the names of the sequences in that bin.\n";
-               helpString += "Note: No spaces between parameter labels (i.e. list), '=' and parameters (i.e.yourListFile).\n\n";
+               helpString += "Note: No spaces between parameter labels (i.e. list), '=' and parameters (i.e.yourListFile).\n";
                return helpString;
        }
        catch(exception& e) {
@@ -69,6 +69,7 @@ GetListCountCommand::GetListCountCommand(string option)  {
                                
                //allow user to run help
                if(option == "help") { help(); abort = true; calledHelp = true; }
+               else if(option == "citation") { citation(); abort = true; calledHelp = true;}
                
                else {
                        vector<string> myArray = setParameters();