string getCommandName() { return "get.coremicrobiome"; }
string getCommandCategory() { return "OTU-Based Approaches"; }
//commmand category choices: Sequence Processing, OTU-Based Approaches, Hypothesis Testing, Phylotype Analysis, General, Clustering and Hidden
- string getHelpString();
+
+ string getHelpString();
+ string getOutputPattern(string);
string getCitation() { return "http://www.mothur.org/wiki/Get.coremicrobiome"; }
string getDescription() { return "determines the fraction of OTUs that are found in varying numbers of samples for different minimum relative abundances"; }