\r
public:\r
FilterSeqsCommand(string);\r
+ FilterSeqsCommand();\r
~FilterSeqsCommand() {};\r
+ vector<string> getRequiredParameters();\r
+ vector<string> getValidParameters();\r
+ vector<string> getRequiredFiles();\r
+ map<string, vector<string> > getOutputFiles() { return outputTypes; }\r
int execute(); \r
void help();\r
\r
int alignmentLength, processors;\r
vector<int> bufferSizes;\r
vector<string> outputNames;\r
+ map<string, vector<string> > outputTypes;\r
\r
char trump;\r
bool abort;\r