fixed linking error in collect, collectshared, and errorcheckor

[mothur.git] / errorchecking.cpp

diff --git a/errorchecking.cpp b/errorchecking.cpp
index cc6cbf9d8d96ac90a55dc68d16d2ffa157079cb1..54465729f5e04c36c6a0e2bed16064a5ea32b9a2 100644 (file)
--- a/errorchecking.cpp
+++ b/errorchecking.cpp
@@ -268,12 +268,6 @@ bool ErrorCheck::checkInput(string input) {
                                if (parameter == "label" )                      { label = value; }
                                if (parameter == "abund" )          { abund = value; }
                                if (parameter == "random" )                     { randomtree = value;   }
-
-                               if (parameter == "comparegroups") { //stores groups to be compared
-                                       sharedGroups.clear(); //clears out old values
-                                       globaldata->splitAtDash(value, sharedGroups);
-                               }
-
                        }
                        
                        //gets the last parameter and value
@@ -345,11 +339,6 @@ bool ErrorCheck::checkInput(string input) {
                                if (parameter == "label" )                      { label = value; }
                                if (parameter == "random" )                     { randomtree = value;   }
                                if (parameter == "abund" )          { abund = value; }
-
-                               if (parameter == "comparegroups") { //stores groups to be compared
-                                       sharedGroups.clear(); //clears out old values
-                                       globaldata->splitAtDash(value, sharedGroups);
-                               }
                        }
                }
                
@@ -420,8 +409,6 @@ bool ErrorCheck::checkInput(string input) {
                        }
                }
 
-               globaldata->clearAbund();
-
                return errorFree;
 }