Reverse sort option.

[fastq-tools.git] / doc / fastq-grep.1

diff --git a/doc/fastq-grep.1 b/doc/fastq-grep.1
index cbd88dcce5ff4ecbf33e5b0db4602a0cc408d5b2..89bae043a5a8f30475500470843464cc3ca4c3f8 100644 (file)
--- a/doc/fastq-grep.1
+++ b/doc/fastq-grep.1
@@ -15,9 +15,15 @@ Input files may be gziped.
 
 .SH OPTIONS
 .TP 
+\fB\-i\fR, \fB\-\-id\fR
+Match the read ID (by default, the sequence is matched).
+.TP
 \fB\-v\fR, \fB\-\-invert\-match\fR
 Invert the sense of matching, to select non-matching entries.
 .TP
+\fB\-m\fR, \fB\-\-mismatches=FILE\fR
+Output non-matching entries to the given file.
+.TP
 \fB\-c\fR, \fB\-\-count\fR
 Suppress normal output; instead output the number of matching (or, non-matching,
 with '-v') entries.