]> git.donarmstrong.com Git - mothur.git/blobdiff - distancedb.cpp
version 1.4
[mothur.git] / distancedb.cpp
index ce7485469fadce116664f4f26d5556192fe5866c..25c95c7a32a2523080bac92b41722ed1f1b91e6d 100644 (file)
@@ -8,9 +8,6 @@
  */
 
 
-using namespace std;
-
-
 #include "database.hpp"
 #include "sequence.hpp"
 #include "distancedb.hpp"
@@ -43,7 +40,7 @@ DistanceDB::DistanceDB(string fastaFileName, string distanceFileName) : Database
 
 /**************************************************************************************************/
 
-Sequence* DistanceDB::findClosestSequence(Sequence* candidateSeq){
+Sequence DistanceDB::findClosestSequence(Sequence* candidateSeq){
        
        hit simAccession = mostSimSequenceVector[searchIndex];
 //     string candidateSeqName, closestMatchSeqName, junk;