trim.seqs filename

[mothur.git] / distancecommand.h

diff --git a/distancecommand.h b/distancecommand.h
index f55f7144fa548fe30eae2b075a8abcf8fd4584f0..ddce0449d5498d48914f95d9ff64900b12837ccf 100644 (file)
--- a/distancecommand.h
+++ b/distancecommand.h
@@ -53,7 +53,7 @@ struct distanceData {
 };
 
 /**************************************************************************************************/
-#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
+#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux) || (__linux__) || (__unix__) || (__unix)
 #else
 static DWORD WINAPI MyDistThreadFunction(LPVOID lpParam){ 
        distanceData* pDataArray;
@@ -178,7 +178,9 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "dist.seqs";                   }
        string getCommandCategory()             { return "Sequence Processing"; }
+       
        string getHelpString(); 
+    string getOutputPattern(string);   
        string getCitation() { return "Schloss PD (2010). The effects of alignment quality, distance calculation method, sequence filtering, and region on the analysis of 16S rRNA gene-based studies. PLoS Comput Biol 6: e1000844. \nhttp://www.mothur.org/wiki/Dist.seqs"; }
        string getDescription()         { return "calculate the pairwaise distances between aligned sequences"; }