void help();
private:
- struct linePair {
+ struct distlinePair {
int start;
int end;
+
};
Dist* distCalculator;
int processors, numNewFasta;
float cutoff;
- map<int, int> processIDS; //end line, processid
- vector<linePair*> lines;
+ vector<int> processIDS; //end line, processid
+ vector<distlinePair> lines;
bool abort;
vector<string> Estimators, outputNames; //holds estimators to be used