]> git.donarmstrong.com Git - mothur.git/blobdiff - deuniquetreecommand.h
fixed bug with dist.shared subsampling. added mode parameter to dist.shared so...
[mothur.git] / deuniquetreecommand.h
index 5131c114986e67c70c43019c44f67830c5ce1e4b..18a6e5e95491603f051b847467db80512d3ad517 100644 (file)
@@ -12,7 +12,6 @@
 
 
 #include "command.hpp"
-#include "treemap.h"
 #include "sharedutilities.h"
 #include "readtree.h"
 
@@ -28,13 +27,13 @@ public:
        string getCommandCategory()             { return "Hypothesis Testing";          }
        string getHelpString(); 
        string getCitation() { return "http://www.mothur.org/wiki/Deunique.tree"; }
+       string getDescription()         { return "add the redundant sequence names back into a tree of unique sequences"; }
        
        int execute();
        void help() { m->mothurOut(getHelpString()); }
        
        
 private:
-       TreeMap* tmap;
        int numUniquesInName;
        
        bool abort;