adding more error checking for list and group files. outputs missing.names or missin...

[mothur.git] / database.hpp

diff --git a/database.hpp b/database.hpp
index 2fced3fcfb80ea3367a9116f5aca858d7baf88f1..01393c130adb3250ffaf5c9ed97fd8a2d4043c1e 100644 (file)
--- a/database.hpp
+++ b/database.hpp
@@ -20,12 +20,15 @@ class Sequence;
 class Database {
 public:
        Database(string);
-       virtual Sequence* findClosestSequence(Sequence*) = 0;
+       virtual ~Database();
+       virtual Sequence findClosestSequence(Sequence*) = 0;
        virtual float getSearchScore();
+       virtual int getLongestBase(); 
+       
 protected:
-       int numSeqs;
+       int numSeqs, longest;
        float searchScore;
-       vector<Sequence*> templateSequences;
+       vector<Sequence> templateSequences;
 };
 
 #endif