helpString += "The .consensus.tre file contains the consensus tree of the trees in your input file.\n";
helpString += "The branch lengths are the percentage of trees in your input file that had the given pair.\n";
helpString += "The .consensuspairs file contains a list of the internal nodes in your tree. For each node, the pair that was used in the consensus tree \n";
- helpString += "is reported with its percentage, as well as the other pairs that were seen for that node but not used and their percentages.\n\n";
+ helpString += "is reported with its percentage, as well as the other pairs that were seen for that node but not used and their percentages.\n";
return helpString;
}
catch(exception& e) {
if (abort == true) { if (calledHelp) { return 0; } return 2; }
+
m->mothurOut("This command is not currently in use."); m->mothurOutEndLine();
/*
t = globaldata->gTree;