testing mpi

[mothur.git] / commandfactory.hpp

diff --git a/commandfactory.hpp b/commandfactory.hpp
index 0cede38b05904dd9252f8987c8782f32f04cc297..6f96e90b4813e961222c60f9bb7390188d19c3e5 100644 (file)
--- a/commandfactory.hpp
+++ b/commandfactory.hpp
@@ -11,23 +11,34 @@
  */
 
 #include "mothur.h"
+#include "mothurout.h";
 
 class Command;
 
 class CommandFactory {
 public:
-       CommandFactory();
-       ~CommandFactory();
+       static CommandFactory* getInstance();
        Command* getCommand(string, string);
+       Command* getCommand();
        bool isValidCommand(string);
        void printCommands(ostream&);
+       void setOutputDirectory(string o)       {       outputDir = o;          }
+       void setInputDirectory(string i)        {       inputDir = i;           }
+       string getOutputDir()                           {       return outputDir;       }
+       bool MPIEnabled(string);
 
 private:
        Command* command;
+       MothurOut* m;
        map<string, string> commands;
        map<string, string>::iterator it;
-
+       string outputDir, inputDir;
        
+       static CommandFactory* _uniqueInstance;
+       CommandFactory( const CommandFactory& ); // Disable copy constructor
+       void operator=( const CommandFactory& ); // Disable assignment operator
+       CommandFactory();
+       ~CommandFactory();
 
 };