#include "libshuffcommand.h"
#include "heatmapcommand.h"
#include "venncommand.h"
-#include "mothur.h"
#include "nocommands.h"
#include "binsequencecommand.h"
#include "getoturepcommand.h"
+#include "treegroupscommand.h"
+#include "bootstrapsharedcommand.h"
/***********************************************************/
else if(commandName == "venn") { command = new VennCommand(); }
else if(commandName == "bin.seqs") { command = new BinSeqCommand(); }
else if(commandName == "get.oturep") { command = new GetOTURepCommand(); }
+ else if(commandName == "tree.shared") { command = new TreeGroupCommand(); }
+ else if(commandName == "bootstrap.shared") { command = new BootSharedCommand(); }
else { command = new NoCommand(); }
return command;