line and label no longer persist between commands. Added phylip formated output...

[mothur.git] / command.hpp

diff --git a/command.hpp b/command.hpp
index 6d734e00b5dd1ef8cc3a4239a8c0b10ad18f8acc..c8dae405fe481a6c468d5e5b1f10f838b59f5763 100644 (file)
--- a/command.hpp
+++ b/command.hpp
@@ -12,11 +12,8 @@
 
 /*This class is a parent to all the command classes.  It has one pure int execute(). */
 
-using namespace std;
-
-#include <iostream>
-#include <fstream>
 
+#include "mothur.h"
 
 class Command {
        public: