fixed bug in sharedcommand and parselistcommand and changed file extension of sorenso...

[mothur.git] / collectsharedcommand.cpp

diff --git a/collectsharedcommand.cpp b/collectsharedcommand.cpp
index 76f7abb5682661620f958b66c84637f0add5c54d..434d4a44311f57300c42623c0b052cff012d9e10 100644 (file)
--- a/collectsharedcommand.cpp
+++ b/collectsharedcommand.cpp
@@ -41,7 +41,7 @@ CollectSharedCommand::CollectSharedCommand(){
                        }else if (globaldata->sharedEstimators[i] == "sharedJabund") {  
                                cDisplays.push_back(new CollectDisplay(new SharedJAbund(), new SharedOneColumnFile(fileNameRoot+"shared.jabund", groupmap->namesOfGroups)));
                        }else if (globaldata->sharedEstimators[i] == "sharedSorensonAbund") { 
-                               cDisplays.push_back(new CollectDisplay(new SharedSorAbund(), new SharedOneColumnFile(fileNameRoot+"shared.sorensonabund", groupmap->namesOfGroups)));
+                               cDisplays.push_back(new CollectDisplay(new SharedSorAbund(), new SharedOneColumnFile(fileNameRoot+"shared.sorabund", groupmap->namesOfGroups)));
                        }else if (globaldata->sharedEstimators[i] == "sharedJclass") { 
                                cDisplays.push_back(new CollectDisplay(new SharedJclass(), new SharedOneColumnFile(fileNameRoot+"shared.jclass", groupmap->namesOfGroups)));
                        }else if (globaldata->sharedEstimators[i] == "sharedSorClass") {