added sequence name to error string in fastq.info. Changed np_shannon to npshannon.

[mothur.git] / clustersplitcommand.h

diff --git a/clustersplitcommand.h b/clustersplitcommand.h
index 28c7d237dccb8ce31542c76f01378b0f8e053d71..c4b236cb12dbfc535c1de5da7840b39f21176fb7 100644 (file)
--- a/clustersplitcommand.h
+++ b/clustersplitcommand.h
@@ -26,9 +26,11 @@ public:
        ~ClusterSplitCommand() {}
        
        vector<string> setParameters();
-       string getCommandName()                 { return "cluster.split";                       }
-       string getCommandCategory()             { return "OTU-Based Approaches";        }
+       string getCommandName()                 { return "cluster.split";               }
+       string getCommandCategory()             { return "Clustering";                  }
        string getHelpString(); 
+       string getCitation() { return "Schloss PD, Westcott SL (2011). Assessing and improving methods used in OTU-based approaches for 16S rRNA gene sequence analysis. Appl Environ Microbiol. \nhttp://www.mothur.org/wiki/Cluster.split"; }
+       string getDescription()         { return "splits your sequences by distance or taxonomy then clusters into OTUs"; }
        
        int execute(); 
        void help() { m->mothurOut(getHelpString()); }