// sequence in the distance matrix.
//ofstream outtemp;
//string temp = "temp";
-//openOutputFile(temp, outtemp);
+//m->openOutputFile(temp, outtemp);
//cout << lv->size() << endl;
seqVec = vector<MatVec>(lv->size());
for (MatData currentCell = dMatrix->begin(); currentCell != dMatrix->end(); currentCell++) {
void Cluster::update(double& cutOFF){
try {
getRowColCells();
-//cout << "got rowcells" << endl;
vector<int> foundCol(nColCells, 0);
// The vector has to be traversed in reverse order to preserve the index
// for faster removal in removeCell()
for (int i=nRowCells-1;i>=0;i--) {
+ //if you are not the smallCell
if (!((rowCells[i]->row == smallRow) && (rowCells[i]->column == smallCol))) {
if (rowCells[i]->row == smallRow) {
search = rowCells[i]->column;