moved mothur's source into a folder to make grabbing just the source easier on github

[mothur.git] / clearmemorycommand.cpp

diff --git a/clearmemorycommand.cpp b/clearmemorycommand.cpp
deleted file mode 100644 (file)
index abdc555..0000000
--- a/clearmemorycommand.cpp
+++ /dev/null
@@ -1,70 +0,0 @@
-/*
- *  clearmemorycommand.cpp
- *  Mothur
- *
- *  Created by westcott on 7/6/11.
- *  Copyright 2011 Schloss Lab. All rights reserved.
- *
- */
-
-#include "clearmemorycommand.h"
-#include "referencedb.h"
-
-//**********************************************************************************************************************
-vector<string> ClearMemoryCommand::setParameters(){    
-       try {
-               vector<string> myArray;
-               return myArray;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "ClearMemoryCommand", "setParameters");
-               exit(1);
-       }
-}
-//**********************************************************************************************************************
-string ClearMemoryCommand::getHelpString(){    
-       try {
-               string helpString = "";
-               helpString += "The clear.memory command removes saved reference data from memory.\n";
-               helpString += "The clear.memory command should be in the following format: clear.memory().\n";
-               return helpString;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "ClearMemoryCommand", "getHelpString");
-               exit(1);
-       }
-}
-//**********************************************************************************************************************
-
-ClearMemoryCommand::ClearMemoryCommand(string option)  {
-       try {
-               abort = false; calledHelp = false;   
-               
-               //allow user to run help
-               if(option == "help") { help(); abort = true; calledHelp = true; }
-               else if(option == "citation") { citation(); abort = true; calledHelp = true;}
-       }
-       catch(exception& e) {
-               m->errorOut(e, "ClearMemoryCommand", "ClearMemoryCommand");
-               exit(1);
-       }
-}
-
-//**********************************************************************************************************************
-
-int ClearMemoryCommand::execute(){
-       try {
-               
-               if (abort == true) { if (calledHelp) { return 0; }  return 2;   }
-               
-               ReferenceDB* rdb = ReferenceDB::getInstance();
-               rdb->clearMemory();
-               
-               return 0;
-       }
-       catch(exception& e) {
-               m->errorOut(e, "ClearMemoryCommand", "execute");
-               exit(1);
-       }
-}
-//**********************************************************************************************************************/