added forward and reverse barcodes to trim.seqs to process illumina seqs

[mothur.git] / clearcutcommand.h

diff --git a/clearcutcommand.h b/clearcutcommand.h
index 89fa1ab81b8c36f552439da56af1f3706bfe19db..942953f71bef907980d93355c5a1070599383f61 100644 (file)
--- a/clearcutcommand.h
+++ b/clearcutcommand.h
@@ -31,6 +31,8 @@ public:
        string getCommandName()                 { return "clearcut";                    }
        string getCommandCategory()             { return "Hypothesis Testing";  }
        string getHelpString(); 
+       string getCitation() { return "Sheneman L, Evans J, Foster JA (2006). Clearcut: a fast implementation of relaxed neighbor joining. Bioinformatics 22: 2823-4. \nhttp://www.mothur.org/wiki/Clearcut"; }
+       string getDescription()         { return "create a tree from a fasta or phylip file"; }
        
        int execute(); 
        void help() { m->mothurOut(getHelpString()); }