added code to check path for uchime and catchall executables

[mothur.git] / classifytreecommand.h

diff --git a/classifytreecommand.h b/classifytreecommand.h
index bd0e1ce4f084ccefae3fd8c088322dca1dc214b5..30957af065686f1f8958f7ea84d4be49c187debe 100644 (file)
--- a/classifytreecommand.h
+++ b/classifytreecommand.h
@@ -24,14 +24,12 @@ public:
        string getCommandCategory()             { return "Phylotype Analysis";          }
        string getHelpString(); 
        string getCitation() { return "http://www.mothur.org/wiki/Classify.tree"; }
-       string getDescription()         { return "Find the concensus taxonomy for the descendant of each tree node"; }
+       string getDescription()         { return "Find the consensus taxonomy for the descendant of each tree node"; }
     
        int execute();
        void help() { m->mothurOut(getHelpString()); }  
        
 private:
-       ReadTree* read;
-    TreeMap* tmap;
        string treefile, taxonomyfile, groupfile, namefile, outputDir;
        bool abort;
        vector<string> outputNames;