1.23.0

[mothur.git] / classify.h

diff --git a/classify.h b/classify.h
index bd9f34bc7eb3f51b6b360ce4b4f18251f194e155..2e209f562108121e8a95b3c4470252537813baed 100644 (file)
--- a/classify.h
+++ b/classify.h
@@ -31,6 +31,7 @@ public:
        virtual string getTaxonomy(Sequence*) = 0;
        virtual string getSimpleTax()  { return simpleTax;      }
        virtual void generateDatabaseAndNames(string, string, string, int, float, float, float, float);
+       virtual void setDistName(string s) {} //for knn, so if distance method is selected with knn you can create the smallest distance file in the right place.
        
 protected:
 
@@ -43,6 +44,7 @@ protected:
        
        string taxFile, templateFile, simpleTax;
        vector<string> names;
+       int threadID;
        
        int readTaxonomy(string);
        vector<string> parseTax(string);