trim.seqs couts

[mothur.git] / chimeraslayercommand.h

diff --git a/chimeraslayercommand.h b/chimeraslayercommand.h
index 926326beb876087f1361278a9523759ab4bc3372..7c20fb912bd321a121a410da45ed9abc87fce474 100644 (file)
--- a/chimeraslayercommand.h
+++ b/chimeraslayercommand.h
@@ -42,12 +42,14 @@ private:
        int driverMPI(int, int, MPI_File&, MPI_File&, MPI_File&, vector<long>&);
        #endif
 
-       bool abort, realign, MPIWroteAccnos;
+       bool abort, realign;
        string fastafile, templatefile, outputDir, search;
        int processors, window, iters, increment, numwanted, ksize, match, mismatch, parents, minSimilarity, minCoverage, minBS, minSNP, numSeqs, templateSeqsLength;
        float divR;
        Chimera* chimera;
        
+       vector<string> outputNames;
+       vector<string> fastaFileNames;
        
 };