fixed valid parameters to include shared parameter for read.shared command.

[mothur.git] / calculator.h

diff --git a/calculator.h b/calculator.h
index 06c3a2425a2a56cbfce3ac3b19b83591dd288c7c..8c935af9cac59cf8be4723eb5d1bbc3aac37cfab 100644 (file)
--- a/calculator.h
+++ b/calculator.h
@@ -3,21 +3,14 @@
 
 using namespace std;
 
-#include <vector>
-#include <cmath>
-#include <iostream>
-#include <fstream>
-#include <math.h>
-#include <string>
-#include <map>
-#include <algorithm>
+#include "mothur.h"
 #include "utilities.hpp"
 #include "sabundvector.hpp"
 #include "sharedsabundvector.h"
 #include "rabundvector.hpp"
 #include "uvest.h"
 
-/* The calculator class is the parent class for all the different estimators implemented in mothur.
+/* The calculator class is the parent class for all the different estimators implemented in mothur except the tree calculators.
 It has 2 pure functions EstOutput getValues(SAbundVector*), which works on a single group, and 
 EstOutput getValues(SharedRAbundVector* shared1, SharedRAbundVector* shared2), which compares 2 groups. */