1.9

[mothur.git] / bootstrapsharedcommand.h

diff --git a/bootstrapsharedcommand.h b/bootstrapsharedcommand.h
index 794da84001135d9b1ab365fc9014ed021a467d38..be4a7648825ba541a253daa74817b120ed087f57 100644 (file)
--- a/bootstrapsharedcommand.h
+++ b/bootstrapsharedcommand.h
@@ -32,9 +32,9 @@ public:
        void help();
        
 private:
-       void createTree(ostream*, Tree*);
+       int createTree(ostream*, Tree*);
        void printSims();
-       void process(SharedOrderVector*);
+       int process(SharedOrderVector*);
        
        
        GlobalData* globaldata;
@@ -56,9 +56,9 @@ private:
 
        bool abort, allLines;
        set<string> labels; //holds labels to be used
-       string outputFile, calc, groups, label;
+       string outputFile, calc, groups, label, outputDir;
        int numGroups, iters;
-       vector<string>  Estimators, Groups; //holds estimators to be used
+       vector<string>  Estimators, Groups, outputNames; //holds estimators to be used
 
 };