//creates tree from similarity matrix and write out file
createTree(out[i], tempTree);
- //save trees for concensus command.
+ //save trees for consensus command.
trees[i].push_back(tempTree);
}
}
globaldata->clear();
- //create concensus trees for each bootstrapped tree set
+ //create consensus trees for each bootstrapped tree set
for (int k = 0; k < trees.size(); k++) {
- mothurOut("Generating concensus tree for " + treeCalculators[k]->getName()); mothurOutEndLine();
+ mothurOut("Generating consensus tree for " + treeCalculators[k]->getName()); mothurOutEndLine();
//set global data to calc trees
globaldata->gTree = trees[k];
string filename = getRootName(globaldata->inputFileName) + treeCalculators[k]->getName() + ".boot" + order->getLabel();
- concensus = new ConcensusCommand(filename);
- concensus->execute();
- delete concensus;
+ consensus = new ConcensusCommand(filename);
+ consensus->execute();
+ delete consensus;
//delete globaldata's tree
for (int m = 0; m < globaldata->gTree.size(); m++) { delete globaldata->gTree[m]; }