void generateDB();
void addSequence(Sequence);
vector<int> findClosestSequences(Sequence*, int);
- vector<int> findClosestMegaBlast(Sequence*, int);
+ vector<int> findClosestMegaBlast(Sequence*, int, int);
private:
string dbFileName;
float gapExtend;
float match;
float misMatch;
+
};
#endif