//while (!m8FileHandle.eof()) { char c = m8FileHandle.get(); if (c == 10 || c == 13){ break; }else{ cout << c; } } //
//cout << endl;
m->gobble(m8FileHandle);
- if (searchScore >= minPerID) {
+ if (score >= minPerID) { //this follows broads CS, but probably should be searchScore...
topMatches.push_back(templateAccession);
Scores.push_back(searchScore);
}