#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
formatdbCommand = path + "blast/bin/formatdb"; // format the database, -o option gives us the ability
#else
- formatdbCommand = path + "blast\\bin\\formatdb";
+ formatdbCommand = path + "blast\\bin\\formatdb.exe";
//wrap entire string in ""
- formatdbCommand = "\"" + formatdbCommand + "\"";
+ //formatdbCommand = "\"" + formatdbCommand + "\"";
#endif
//test to make sure formatdb exists
#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
blastCommand = path + "blast/bin/blastall"; // format the database, -o option gives us the ability
#else
- blastCommand = path + "blast\\bin\\blastall";
+ blastCommand = path + "blast\\bin\\blastall.exe";
//wrap entire string in ""
- blastCommand = "\"" + blastCommand + "\"";
+ //blastCommand = "\"" + blastCommand + "\"";
#endif
//test to make sure formatdb exists
#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
megablastCommand = path + "blast/bin/megablast"; // format the database, -o option gives us the ability
#else
- megablastCommand = path + "blast\\bin\\megablast";
+ megablastCommand = path + "blast\\bin\\megablast.exe";
//wrap entire string in ""
- megablastCommand = "\"" + blastCommmegablastCommandand + "\"";
+ //megablastCommand = "\"" + megablastCommand + "\"";
#endif
//test to make sure formatdb exists
#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
formatdbCommand = path + "blast/bin/formatdb"; // format the database, -o option gives us the ability
#else
- formatdbCommand = path + "blast\\bin\\formatdb";
+ formatdbCommand = path + "blast\\bin\\formatdb.exe";
//wrap entire string in ""
- formatdbCommand = "\"" + formatdbCommand + "\"";
+ //formatdbCommand = "\"" + formatdbCommand + "\"";
#endif
//test to make sure formatdb exists
#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
blastCommand = path + "blast/bin/blastall"; // format the database, -o option gives us the ability
#else
- blastCommand = path + "blast\\bin\\blastall";
+ blastCommand = path + "blast\\bin\\blastall.exe";
//wrap entire string in ""
- blastCommand = "\"" + blastCommand + "\"";
+ //blastCommand = "\"" + blastCommand + "\"";
#endif
//test to make sure formatdb exists
#if defined (__APPLE__) || (__MACH__) || (linux) || (__linux)
megablastCommand = path + "blast/bin/megablast"; // format the database, -o option gives us the ability
#else
- megablastCommand = path + "blast\\bin\\megablast";
+ megablastCommand = path + "blast\\bin\\megablast.exe";
//wrap entire string in ""
- megablastCommand = "\"" + blastCommmegablastCommandand + "\"";
+ //megablastCommand = "\"" + megablastCommand + "\"";
#endif
//test to make sure formatdb exists