testing 1.22.0

[mothur.git] / blastalign.hpp

diff --git a/blastalign.hpp b/blastalign.hpp
index 0f755d852cb0fdb793c40e88613dd8b19076c991..5b78da6b635770b53453cf9b6ec84493b17bf71a 100644 (file)
--- a/blastalign.hpp
+++ b/blastalign.hpp
@@ -13,17 +13,21 @@
  
 #include "mothur.h"
 
+
 class BlastAlignment : public Alignment {
 
 public:
        BlastAlignment(float, float, float, float);
        ~BlastAlignment();
        void align(string, string);
+       void setMatrix(int){};
+       
 private:
 
        string candidateFileName;
        string templateFileName;
        string blastFileName;
+       string path;
 
        void setPairwiseSeqs();
        float match;