*** empty log message ***

[mothur.git] / binsequencecommand.h

diff --git a/binsequencecommand.h b/binsequencecommand.h
index 25f52160e6c314e300e0abd6f303c378881cf2af..e2ff648283a9c00569a8d2a4170a040b4a494902 100644 (file)
--- a/binsequencecommand.h
+++ b/binsequencecommand.h
@@ -14,8 +14,9 @@
 #include "command.hpp"
 #include "inputdata.h"
 #include "listvector.hpp"
-#include "readmatrix.hpp"
+#include "readotu.h"
 #include "fastamap.h"
+#include "groupmap.h"
 
 
 class GlobalData;
@@ -30,10 +31,11 @@ public:
 private:
        GlobalData* globaldata;
        ListVector* list;
-       ReadMatrix* read;
+       ReadOTUFile* read;
        InputData* input;
        FastaMap* fasta;
-       string filename, fastafile, namesfile;
+       GroupMap* groupMap;
+       string filename, fastafile, namesfile, groupfile;
        ofstream out;
        ifstream in, inNames;