some changes on qFinderDMM

[mothur.git] / binsequencecommand.cpp

diff --git a/binsequencecommand.cpp b/binsequencecommand.cpp
index 7798a4d74f749eed04d4554c796776a58697b98b..f9784b3ea91e09d1c0d86232b67b70bc5e789b99 100644 (file)
--- a/binsequencecommand.cpp
+++ b/binsequencecommand.cpp
@@ -249,7 +249,7 @@ int BinSeqCommand::execute(){
                
                //if user gave a namesfile then use it
                if (namesfile != "") {  readNamesFile();  }
-        if (countfile != "") {  ct.readTable(countfile);  }
+        if (countfile != "") {  ct.readTable(countfile, true, false);  }
                
                input = new InputData(listfile, "list");
                list = input->getListVector();