working on sffinfo command.

[mothur.git] / bayesian.cpp

diff --git a/bayesian.cpp b/bayesian.cpp
index b46f7703a971b8b5141d42faf14e26d45037cba0..655d7027b5dabbe3a7ebeae94edbc95724d371c5 100644 (file)
--- a/bayesian.cpp
+++ b/bayesian.cpp
@@ -50,6 +50,9 @@ Classify(), kmerSize(ksize), confidenceThreshold(cutoff), iters(i)  {
                        //create search database and names vector
                        generateDatabaseAndNames(tfile, tempFile, method, ksize, 0.0, 0.0, 0.0, 0.0);
                        
+                       //prevents errors caused by creating shortcut files if you had an error in the sanity check.
+                       if (m->control_pressed) {  remove(phyloTreeName.c_str());   }
+                       
                        genusNodes = phyloTree->getGenusNodes(); 
                        genusTotals = phyloTree->getGenusTotals();
                        
@@ -365,8 +368,8 @@ void Bayesian::readProbFile(ifstream& in, ifstream& inNum, string inName, string
                #ifdef USE_MPI
                        
                        int pid, num, num2, processors;
-                       vector<long> positions;
-                       vector<long> positions2;
+                       vector<unsigned long int> positions;
+                       vector<unsigned long int> positions2;
                        
                        MPI_Status status; 
                        MPI_File inMPI;