added phylip as output file type for commands that output distance matrices. added...

[mothur.git] / amovacommand.h

diff --git a/amovacommand.h b/amovacommand.h
index f50df46f70a3c6cce602ba8eeb5a4987c6dd2c95..6b3c83a4fb09c51f23b01ff38abeb2d939e8e79a 100644 (file)
--- a/amovacommand.h
+++ b/amovacommand.h
@@ -23,7 +23,10 @@ public:
        vector<string> setParameters();
        string getCommandName()                 { return "amova";                                       }
        string getCommandCategory()             { return "Hypothesis Testing";          }
+       string getOutputFileNameTag(string, string);
        string getHelpString(); 
+       string getCitation() { return "Anderson MJ (2001). A new method for non-parametric multivariate analysis of variance. Austral Ecol 26: 32-46.\nhttp://www.mothur.org/wiki/Amova"; }
+       string getDescription()         { return "analysis of molecular variance"; }
        
        int execute();
        void help() { m->mothurOut(getHelpString()); }