public:
- AlignmentDB(string, string, int, float, float, float, float); //reads fastafile passed in and stores sequences
+ AlignmentDB(string, string, int, float, float, float, float, int); //reads fastafile passed in and stores sequences
AlignmentDB(string);
- AlignmentDB(const AlignmentDB& adb);
~AlignmentDB();
Sequence findClosestSequence(Sequence*);
int getLongestBase() { return longest; }
private:
- int numSeqs, longest;
+ int numSeqs, longest, threadID;
string method;
Database* search;