objects = {
/* Begin PBXBuildFile section */
+ 219C1DE01552C4BD004209F9 /* newcommandtemplate.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 219C1DDF1552C4BD004209F9 /* newcommandtemplate.cpp */; };
+ 219C1DE41559BCCF004209F9 /* getcoremicrobiomecommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 219C1DE31559BCCD004209F9 /* getcoremicrobiomecommand.cpp */; };
7E6BE10A12F710D8007ADDBE /* refchimeratest.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 7E6BE10912F710D8007ADDBE /* refchimeratest.cpp */; };
8DD76FB00486AB0100D96B5E /* mothur.1 in CopyFiles */ = {isa = PBXBuildFile; fileRef = C6A0FF2C0290799A04C91782 /* mothur.1 */; };
A70332B712D3A13400761E33 /* makefile in Sources */ = {isa = PBXBuildFile; fileRef = A70332B512D3A13400761E33 /* makefile */; };
A79234D713C74BF6002B08E2 /* mothurfisher.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A79234D613C74BF6002B08E2 /* mothurfisher.cpp */; };
A795840D13F13CD900F201D5 /* countgroupscommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A795840C13F13CD900F201D5 /* countgroupscommand.cpp */; };
A799F5B91309A3E000AEEFA0 /* makefastqcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A799F5B81309A3E000AEEFA0 /* makefastqcommand.cpp */; };
+ A7A0671A1562946F0095C8C5 /* listotulabelscommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A7A067191562946F0095C8C5 /* listotulabelscommand.cpp */; };
+ A7A0671F1562AC3E0095C8C5 /* makecontigscommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A7A0671E1562AC3E0095C8C5 /* makecontigscommand.cpp */; };
A7A32DAA14DC43B00001D2E5 /* sortseqscommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A7A32DA914DC43B00001D2E5 /* sortseqscommand.cpp */; };
A7A3C8C914D041AD00B1BFBE /* otuassociationcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A7A3C8C714D041AD00B1BFBE /* otuassociationcommand.cpp */; };
A7A61F2D130062E000E05B6B /* amovacommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = A7A61F2C130062E000E05B6B /* amovacommand.cpp */; };
/* End PBXCopyFilesBuildPhase section */
/* Begin PBXFileReference section */
+ 219C1DDF1552C4BD004209F9 /* newcommandtemplate.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = newcommandtemplate.cpp; sourceTree = "<group>"; };
+ 219C1DE11552C508004209F9 /* newcommandtemplate.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = newcommandtemplate.h; sourceTree = "<group>"; };
+ 219C1DE31559BCCD004209F9 /* getcoremicrobiomecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = getcoremicrobiomecommand.cpp; sourceTree = "<group>"; };
+ 219C1DE51559BCF2004209F9 /* getcoremicrobiomecommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = getcoremicrobiomecommand.h; sourceTree = "<group>"; };
7E6BE10812F710D8007ADDBE /* refchimeratest.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = refchimeratest.h; sourceTree = "<group>"; };
7E6BE10912F710D8007ADDBE /* refchimeratest.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = refchimeratest.cpp; sourceTree = "<group>"; };
7E78911B135F3E8600E725D2 /* eachgapdistignorens.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = eachgapdistignorens.h; sourceTree = "<group>"; };
- 8DD76FB20486AB0100D96B5E /* Mothur */ = {isa = PBXFileReference; explicitFileType = "compiled.mach-o.executable"; includeInIndex = 0; path = Mothur; sourceTree = BUILT_PRODUCTS_DIR; };
+ 8DD76FB20486AB0100D96B5E /* mothur */ = {isa = PBXFileReference; explicitFileType = "compiled.mach-o.executable"; includeInIndex = 0; path = mothur; sourceTree = BUILT_PRODUCTS_DIR; };
A70332B512D3A13400761E33 /* makefile */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.make; path = makefile; sourceTree = "<group>"; };
A713EBAA12DC7613000092AC /* readphylipvector.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = readphylipvector.h; sourceTree = "<group>"; };
A713EBAB12DC7613000092AC /* readphylipvector.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = readphylipvector.cpp; sourceTree = "<group>"; };
A795840C13F13CD900F201D5 /* countgroupscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = countgroupscommand.cpp; sourceTree = "<group>"; };
A799F5B71309A3E000AEEFA0 /* makefastqcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = makefastqcommand.h; sourceTree = "<group>"; };
A799F5B81309A3E000AEEFA0 /* makefastqcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = makefastqcommand.cpp; sourceTree = "<group>"; };
+ A7A067191562946F0095C8C5 /* listotulabelscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = listotulabelscommand.cpp; sourceTree = "<group>"; };
+ A7A0671C156294810095C8C5 /* listotulabelscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = listotulabelscommand.h; sourceTree = "<group>"; };
+ A7A0671D1562AC230095C8C5 /* makecontigscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = makecontigscommand.h; sourceTree = "<group>"; };
+ A7A0671E1562AC3E0095C8C5 /* makecontigscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = makecontigscommand.cpp; sourceTree = "<group>"; };
A7A32DA914DC43B00001D2E5 /* sortseqscommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sortseqscommand.cpp; sourceTree = "<group>"; };
A7A32DAC14DC43D10001D2E5 /* sortseqscommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sortseqscommand.h; sourceTree = "<group>"; };
A7A3C8C714D041AD00B1BFBE /* otuassociationcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = otuassociationcommand.cpp; sourceTree = "<group>"; };
1AB674ADFE9D54B511CA2CBB /* Products */ = {
isa = PBXGroup;
children = (
- 8DD76FB20486AB0100D96B5E /* Mothur */,
+ 8DD76FB20486AB0100D96B5E /* mothur */,
);
name = Products;
sourceTree = "<group>";
isa = PBXGroup;
children = (
A7E9B6AE12D37EC400DA6239 /* command.hpp */,
+ 219C1DE11552C508004209F9 /* newcommandtemplate.h */,
+ 219C1DDF1552C4BD004209F9 /* newcommandtemplate.cpp */,
A7E9B65212D37EC300DA6239 /* aligncommand.h */,
A7E9B65112D37EC300DA6239 /* aligncommand.cpp */,
A7A61F2B130062E000E05B6B /* amovacommand.h */,
A7E9B6E312D37EC400DA6239 /* filterseqscommand.cpp */,
A778FE69134CA6CA00C0BA33 /* getcommandinfocommand.h */,
A778FE6A134CA6CA00C0BA33 /* getcommandinfocommand.cpp */,
+ 219C1DE51559BCF2004209F9 /* getcoremicrobiomecommand.h */,
+ 219C1DE31559BCCD004209F9 /* getcoremicrobiomecommand.cpp */,
A7FE7C3E1330EA1000F7B327 /* getcurrentcommand.h */,
A7FE7C3F1330EA1000F7B327 /* getcurrentcommand.cpp */,
A7E9B6F312D37EC400DA6239 /* getgroupcommand.h */,
A7E9B73B12D37EC400DA6239 /* libshuffcommand.cpp */,
A7E9B73E12D37EC400DA6239 /* listseqscommand.h */,
A7E9B73D12D37EC400DA6239 /* listseqscommand.cpp */,
+ A7A0671C156294810095C8C5 /* listotulabelscommand.h */,
+ A7A067191562946F0095C8C5 /* listotulabelscommand.cpp */,
A7FA10001302E096003860FE /* mantelcommand.h */,
A7FA10011302E096003860FE /* mantelcommand.cpp */,
A724D2B4153C8600000A826F /* makebiomcommand.h */,
A724D2B6153C8628000A826F /* makebiomcommand.cpp */,
+ A7A0671D1562AC230095C8C5 /* makecontigscommand.h */,
+ A7A0671E1562AC3E0095C8C5 /* makecontigscommand.cpp */,
A799F5B71309A3E000AEEFA0 /* makefastqcommand.h */,
A799F5B81309A3E000AEEFA0 /* makefastqcommand.cpp */,
A7E9B74412D37EC400DA6239 /* makegroupcommand.h */,
name = Mothur;
productInstallPath = "$(HOME)/bin";
productName = mothur;
- productReference = 8DD76FB20486AB0100D96B5E /* Mothur */;
+ productReference = 8DD76FB20486AB0100D96B5E /* mothur */;
productType = "com.apple.product-type.tool";
};
/* End PBXNativeTarget section */
A7876A26152A017C00A0AE86 /* subsample.cpp in Sources */,
A7D755DA1535F679009BF21A /* treereader.cpp in Sources */,
A724D2B7153C8628000A826F /* makebiomcommand.cpp in Sources */,
+ 219C1DE01552C4BD004209F9 /* newcommandtemplate.cpp in Sources */,
+ 219C1DE41559BCCF004209F9 /* getcoremicrobiomecommand.cpp in Sources */,
+ A7A0671A1562946F0095C8C5 /* listotulabelscommand.cpp in Sources */,
+ A7A0671F1562AC3E0095C8C5 /* makecontigscommand.cpp in Sources */,
);
runOnlyForDeploymentPostprocessing = 0;
};
buildSettings = {
ALWAYS_SEARCH_USER_PATHS = NO;
COPY_PHASE_STRIP = NO;
+ DEPLOYMENT_LOCATION = YES;
GCC_DYNAMIC_NO_PIC = NO;
GCC_MODEL_TUNING = G5;
GCC_OPTIMIZATION_LEVEL = 0;
- INSTALL_PATH = /usr/local/bin;
- PRODUCT_NAME = Mothur;
+ PRODUCT_NAME = mothur;
SDKROOT = macosx10.6;
+ SKIP_INSTALL = NO;
};
name = Debug;
};
DEPLOYMENT_LOCATION = YES;
GCC_MODEL_TUNING = G5;
GCC_WARN_UNUSED_VALUE = YES;
- INSTALL_PATH = ./;
- PRODUCT_NAME = Mothur;
+ PRODUCT_NAME = mothur;
+ SKIP_INSTALL = NO;
};
name = Release;
};
GCC_OPTIMIZATION_LEVEL = 0;
GCC_PREPROCESSOR_DEFINITIONS = (
"MOTHUR_FILES=\"\\\"../release\\\"\"",
- "VERSION=\"\\\"1.24.0\\\"\"",
- "RELEASE_DATE=\"\\\"3/12/2012\\\"\"",
+ "VERSION=\"\\\"1.25.0\\\"\"",
+ "RELEASE_DATE=\"\\\"5/01/2012\\\"\"",
);
"GCC_VERSION[arch=*]" = "";
GCC_WARN_ABOUT_MISSING_NEWLINE = YES;
GCC_WARN_ABOUT_RETURN_TYPE = YES;
GCC_WARN_UNUSED_VARIABLE = YES;
HEADER_SEARCH_PATHS = "";
- INSTALL_PATH = "";
+ INSTALL_PATH = TARGET_BUILD_DIR;
MACH_O_TYPE = mh_execute;
ONLY_ACTIVE_ARCH = YES;
OTHER_CPLUSPLUSFLAGS = (
"-lreadline",
);
SDKROOT = macosx10.6;
+ SKIP_INSTALL = NO;
USER_HEADER_SEARCH_PATHS = "";
};
name = Debug;
GCC_WARN_UNUSED_PARAMETER = YES;
GCC_WARN_UNUSED_VALUE = YES;
GCC_WARN_UNUSED_VARIABLE = YES;
- INSTALL_PATH = "";
+ INSTALL_PATH = TARGET_BUILD_DIR;
MACH_O_TYPE = mh_execute;
OTHER_CPLUSPLUSFLAGS = (
"-DUSE_READLINE",
"-lreadline",
);
SDKROOT = macosx10.6;
+ SKIP_INSTALL = NO;
};
name = Release;
};
projects / mothur.git / blobdiff