modified freq parameter be a percentage of numSeqs, added catchall command - not...

[mothur.git] / Mothur.xcodeproj / project.pbxproj

diff --git a/Mothur.xcodeproj/project.pbxproj b/Mothur.xcodeproj/project.pbxproj
index f9fd39e7ef1d4ba3baedb85737dbc1c8f6ce520c..5b5981b1608c62ffbc486921d3c1f3e5cdc8dcb8 100644 (file)
--- a/Mothur.xcodeproj/project.pbxproj
+++ b/Mothur.xcodeproj/project.pbxproj
@@ -30,6 +30,10 @@
                A7825503116519F70002E2DD /* chimerabellerophoncommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = chimerabellerophoncommand.cpp; sourceTree = "<group>"; };
                A78434881162224F00100BE0 /* chimeraccodecommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = chimeraccodecommand.h; sourceTree = "<group>"; };
                A78434891162224F00100BE0 /* chimeraccodecommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = chimeraccodecommand.cpp; sourceTree = "<group>"; };
+               A7D215C811996C6E00F13F13 /* clearcutcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = clearcutcommand.h; sourceTree = "<group>"; };
+               A7D215C911996C6E00F13F13 /* clearcutcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = clearcutcommand.cpp; sourceTree = "<group>"; };
+               A7D216061199C47F00F13F13 /* catchallcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = catchallcommand.h; sourceTree = "<group>"; };
+               A7D216071199C47F00F13F13 /* catchallcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = catchallcommand.cpp; sourceTree = "<group>"; };
                A7DA1FEC113FECD400BF472F /* ace.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = ace.cpp; sourceTree = "<group>"; };
                A7DA1FED113FECD400BF472F /* ace.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = ace.h; sourceTree = "<group>"; };
                A7DA1FEE113FECD400BF472F /* aligncommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = aligncommand.cpp; sourceTree = "<group>"; };
@@ -644,6 +648,8 @@
                                A7DA1FFE113FECD400BF472F /* binsequencecommand.h */,
                                A7DA2007113FECD400BF472F /* bootstrapsharedcommand.cpp */,
                                A7DA2008113FECD400BF472F /* bootstrapsharedcommand.h */,
+                               A7D216061199C47F00F13F13 /* catchallcommand.h */,
+                               A7D216071199C47F00F13F13 /* catchallcommand.cpp */,
                                A7DA2017113FECD400BF472F /* chimeraseqscommand.cpp */,
                                A78434881162224F00100BE0 /* chimeraccodecommand.h */,
                                A7DA2018113FECD400BF472F /* chimeraseqscommand.h */,
@@ -660,6 +666,8 @@
                                A73953DB11987ED100B0B160 /* chopseqscommand.cpp */,
                                A7DA201E113FECD400BF472F /* classifyseqscommand.h */,
                                A7DA201D113FECD400BF472F /* classifyseqscommand.cpp */,
+                               A7D215C811996C6E00F13F13 /* clearcutcommand.h */,
+                               A7D215C911996C6E00F13F13 /* clearcutcommand.cpp */,
                                A7DA2021113FECD400BF472F /* clustercommand.cpp */,
                                A7DA2022113FECD400BF472F /* clustercommand.h */,
                                A7DA2025113FECD400BF472F /* collectcommand.cpp */,