]> git.donarmstrong.com Git - mothur.git/blobdiff - Mothur.xcodeproj/project.pbxproj
started heatmap command
[mothur.git] / Mothur.xcodeproj / project.pbxproj
index a403f35250d8e910f63798ac2ae26e46798b810c..3c32966ef460ac5ac4617ae16014c43ebd0cc851 100644 (file)
@@ -7,6 +7,11 @@
        objects = {
 
 /* Begin PBXBuildFile section */
+               217595330F791EEE001CC3C6 /* sharedkulczynski.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 217595320F791EEE001CC3C6 /* sharedkulczynski.cpp */; };
+               2175953F0F792111001CC3C6 /* sharedkulczynskicody.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 2175953E0F792111001CC3C6 /* sharedkulczynskicody.cpp */; };
+               217595590F792490001CC3C6 /* sharedlennon.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 217595580F792490001CC3C6 /* sharedlennon.cpp */; };
+               217595640F7927BB001CC3C6 /* sharedmorisitahorn.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 217595630F7927BB001CC3C6 /* sharedmorisitahorn.cpp */; };
+               217595710F792A33001CC3C6 /* sharedbraycurtis.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 217595700F792A33001CC3C6 /* sharedbraycurtis.cpp */; };
                372E12700F26365B0095CF7E /* readotucommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 372E126F0F26365B0095CF7E /* readotucommand.cpp */; };
                372E12960F263D5A0095CF7E /* readdistcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 372E12950F263D5A0095CF7E /* readdistcommand.cpp */; };
                372E12ED0F264D320095CF7E /* commandfactory.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 372E12EC0F264D320095CF7E /* commandfactory.cpp */; };
                3746107E0F4064D100460C57 /* weighted.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3746107D0F4064D100460C57 /* weighted.cpp */; };
                374610830F40652400460C57 /* unweighted.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 374610820F40652400460C57 /* unweighted.cpp */; };
                3746109D0F40657600460C57 /* unifracunweightedcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3746109C0F40657600460C57 /* unifracunweightedcommand.cpp */; };
+               374CD63F0F65832000D90B4A /* libshuffcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 374CD63E0F65832000D90B4A /* libshuffcommand.cpp */; };
+               374CD6F10F65A4C100D90B4A /* coverage.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 374CD6F00F65A4C100D90B4A /* coverage.cpp */; };
+               3765B47A0F77D15900C3EDC5 /* nocommands.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3765B4780F77D15900C3EDC5 /* nocommands.cpp */; };
+               3765B4E20F78055000C3EDC5 /* sharedochiai.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3765B4E10F78055000C3EDC5 /* sharedochiai.cpp */; };
+               3765B5160F780A7F00C3EDC5 /* sharedanderberg.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3765B5150F780A7F00C3EDC5 /* sharedanderberg.cpp */; };
+               3765B5380F7A5A9E00C3EDC5 /* heatmapcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3765B5370F7A5A9E00C3EDC5 /* heatmapcommand.cpp */; };
+               3765B5460F7A62A000C3EDC5 /* heatmap.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3765B5450F7A62A000C3EDC5 /* heatmap.cpp */; };
                3782163D0F616079008E1F6D /* fullmatrix.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3782163C0F616079008E1F6D /* fullmatrix.cpp */; };
                379293C30F2DE73400B9034A /* treemap.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 379293C20F2DE73400B9034A /* treemap.cpp */; };
                379294700F2E191800B9034A /* parsimonycommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 3792946F0F2E191800B9034A /* parsimonycommand.cpp */; };
@@ -50,7 +62,6 @@
                37D9286E0F21331F001D4494 /* listvector.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927ED0F21331F001D4494 /* listvector.cpp */; };
                37D9286F0F21331F001D4494 /* mothur.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927EF0F21331F001D4494 /* mothur.cpp */; };
                37D928700F21331F001D4494 /* nameassignment.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927F00F21331F001D4494 /* nameassignment.cpp */; };
-               37D928710F21331F001D4494 /* nocommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927F20F21331F001D4494 /* nocommand.cpp */; };
                37D928720F21331F001D4494 /* npshannon.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927F40F21331F001D4494 /* npshannon.cpp */; };
                37D928730F21331F001D4494 /* ordervector.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927F70F21331F001D4494 /* ordervector.cpp */; };
                37D928740F21331F001D4494 /* parselistcommand.cpp in Sources */ = {isa = PBXBuildFile; fileRef = 37D927F90F21331F001D4494 /* parselistcommand.cpp */; };
 /* End PBXCopyFilesBuildPhase section */
 
 /* Begin PBXFileReference section */
+               217595310F791EEE001CC3C6 /* sharedkulczynski.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedkulczynski.h; sourceTree = "<group>"; };
+               217595320F791EEE001CC3C6 /* sharedkulczynski.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedkulczynski.cpp; sourceTree = "<group>"; };
+               2175953D0F792111001CC3C6 /* sharedkulczynskicody.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedkulczynskicody.h; sourceTree = "<group>"; };
+               2175953E0F792111001CC3C6 /* sharedkulczynskicody.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedkulczynskicody.cpp; sourceTree = "<group>"; };
+               217595570F792490001CC3C6 /* sharedlennon.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedlennon.h; sourceTree = "<group>"; };
+               217595580F792490001CC3C6 /* sharedlennon.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedlennon.cpp; sourceTree = "<group>"; };
+               217595620F7927BB001CC3C6 /* sharedmorisitahorn.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedmorisitahorn.h; sourceTree = "<group>"; };
+               217595630F7927BB001CC3C6 /* sharedmorisitahorn.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedmorisitahorn.cpp; sourceTree = "<group>"; };
+               2175956F0F792A33001CC3C6 /* sharedbraycurtis.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedbraycurtis.h; sourceTree = "<group>"; };
+               217595700F792A33001CC3C6 /* sharedbraycurtis.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedbraycurtis.cpp; sourceTree = "<group>"; };
+               370936DE0F6E7A4A00EB4C2C /* nseqs.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = nseqs.h; sourceTree = "<group>"; };
+               3709370A0F6E7FC100EB4C2C /* sharednseqs.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharednseqs.h; sourceTree = "<group>"; };
                372E126E0F26365B0095CF7E /* readotucommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = readotucommand.h; sourceTree = "<group>"; };
                372E126F0F26365B0095CF7E /* readotucommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = readotucommand.cpp; sourceTree = "<group>"; };
                372E12940F263D5A0095CF7E /* readdistcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = readdistcommand.h; sourceTree = "<group>"; };
                374610820F40652400460C57 /* unweighted.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = unweighted.cpp; sourceTree = "<group>"; };
                3746109B0F40657600460C57 /* unifracunweightedcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = unifracunweightedcommand.h; sourceTree = "<group>"; };
                3746109C0F40657600460C57 /* unifracunweightedcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = unifracunweightedcommand.cpp; sourceTree = "<group>"; };
+               374CD63D0F65832000D90B4A /* libshuffcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = libshuffcommand.h; sourceTree = "<group>"; };
+               374CD63E0F65832000D90B4A /* libshuffcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = libshuffcommand.cpp; sourceTree = "<group>"; };
+               374CD6EF0F65A4C100D90B4A /* coverage.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = coverage.h; sourceTree = "<group>"; };
+               374CD6F00F65A4C100D90B4A /* coverage.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = coverage.cpp; sourceTree = "<group>"; };
+               3765B4780F77D15900C3EDC5 /* nocommands.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = nocommands.cpp; sourceTree = "<group>"; };
+               3765B4790F77D15900C3EDC5 /* nocommands.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = nocommands.h; sourceTree = "<group>"; };
+               3765B4E00F78055000C3EDC5 /* sharedochiai.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedochiai.h; sourceTree = "<group>"; };
+               3765B4E10F78055000C3EDC5 /* sharedochiai.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedochiai.cpp; sourceTree = "<group>"; };
+               3765B5140F780A7F00C3EDC5 /* sharedanderberg.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = sharedanderberg.h; sourceTree = "<group>"; };
+               3765B5150F780A7F00C3EDC5 /* sharedanderberg.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = sharedanderberg.cpp; sourceTree = "<group>"; };
+               3765B5360F7A5A9E00C3EDC5 /* heatmapcommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = heatmapcommand.h; sourceTree = "<group>"; };
+               3765B5370F7A5A9E00C3EDC5 /* heatmapcommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = heatmapcommand.cpp; sourceTree = "<group>"; };
+               3765B5440F7A62A000C3EDC5 /* heatmap.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = heatmap.h; sourceTree = "<group>"; };
+               3765B5450F7A62A000C3EDC5 /* heatmap.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = heatmap.cpp; sourceTree = "<group>"; };
                3782163B0F616079008E1F6D /* fullmatrix.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = fullmatrix.h; sourceTree = "<group>"; };
                3782163C0F616079008E1F6D /* fullmatrix.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = fullmatrix.cpp; sourceTree = "<group>"; };
                379293C10F2DE73400B9034A /* treemap.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = treemap.h; sourceTree = "<group>"; };
                37D927EF0F21331F001D4494 /* mothur.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = mothur.cpp; sourceTree = "<group>"; };
                37D927F00F21331F001D4494 /* nameassignment.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = nameassignment.cpp; sourceTree = "<group>"; };
                37D927F10F21331F001D4494 /* nameassignment.hpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.h; path = nameassignment.hpp; sourceTree = "<group>"; };
-               37D927F20F21331F001D4494 /* nocommand.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = nocommand.cpp; sourceTree = "<group>"; };
-               37D927F30F21331F001D4494 /* nocommand.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = nocommand.h; sourceTree = "<group>"; };
                37D927F40F21331F001D4494 /* npshannon.cpp */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.cpp.cpp; path = npshannon.cpp; sourceTree = "<group>"; };
                37D927F50F21331F001D4494 /* npshannon.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = npshannon.h; sourceTree = "<group>"; };
                37D927F60F21331F001D4494 /* observable.h */ = {isa = PBXFileReference; fileEncoding = 4; lastKnownFileType = sourcecode.c.h; path = observable.h; sourceTree = "<group>"; };
                                37D927DD0F21331F001D4494 /* fileoutput.cpp */,
                                37D927E00F21331F001D4494 /* globaldata.hpp */,
                                37D927DF0F21331F001D4494 /* globaldata.cpp */,
+                               3765B5440F7A62A000C3EDC5 /* heatmap.h */,
+                               3765B5450F7A62A000C3EDC5 /* heatmap.cpp */,
                                37D927E60F21331F001D4494 /* inputdata.h */,
                                37D927E50F21331F001D4494 /* inputdata.cpp */,
                                37D927EA0F21331F001D4494 /* kmer.hpp */,
                                37D927BB0F21331F001D4494 /* bootstrap.cpp */,
                                37D927C00F21331F001D4494 /* chao1.h */,
                                37D927BF0F21331F001D4494 /* chao1.cpp */,
+                               374CD6EF0F65A4C100D90B4A /* coverage.h */,
+                               374CD6F00F65A4C100D90B4A /* coverage.cpp */,
                                37D927E80F21331F001D4494 /* jackknife.h */,
                                37D927E70F21331F001D4494 /* jackknife.cpp */,
                                37D927F50F21331F001D4494 /* npshannon.h */,
                                37D927F40F21331F001D4494 /* npshannon.cpp */,
+                               370936DE0F6E7A4A00EB4C2C /* nseqs.h */,
                                379294880F2E258500B9034A /* parsimony.h */,
                                379294890F2E258500B9034A /* parsimony.cpp */,
                                37D928020F21331F001D4494 /* rarecalc.h */,
                                37D9281E0F21331F001D4494 /* shannon.cpp */,
                                37D928230F21331F001D4494 /* sharedace.h */,
                                37D928220F21331F001D4494 /* sharedace.cpp */,
+                               3765B5140F780A7F00C3EDC5 /* sharedanderberg.h */,
+                               3765B5150F780A7F00C3EDC5 /* sharedanderberg.cpp */,
+                               2175956F0F792A33001CC3C6 /* sharedbraycurtis.h */,
+                               217595700F792A33001CC3C6 /* sharedbraycurtis.cpp */,
                                37D928250F21331F001D4494 /* sharedchao1.h */,
                                37D928240F21331F001D4494 /* sharedchao1.cpp */,
                                37D928290F21331F001D4494 /* sharedjabund.h */,
                                37D9282A0F21331F001D4494 /* sharedjclass.cpp */,
                                37D9282D0F21331F001D4494 /* sharedjest.h */,
                                37D9282C0F21331F001D4494 /* sharedjest.cpp */,
+                               217595310F791EEE001CC3C6 /* sharedkulczynski.h */,
+                               217595320F791EEE001CC3C6 /* sharedkulczynski.cpp */,
+                               2175953D0F792111001CC3C6 /* sharedkulczynskicody.h */,
+                               2175953E0F792111001CC3C6 /* sharedkulczynskicody.cpp */,
+                               217595570F792490001CC3C6 /* sharedlennon.h */,
+                               217595580F792490001CC3C6 /* sharedlennon.cpp */,
+                               217595620F7927BB001CC3C6 /* sharedmorisitahorn.h */,
+                               217595630F7927BB001CC3C6 /* sharedmorisitahorn.cpp */,
+                               3709370A0F6E7FC100EB4C2C /* sharednseqs.h */,
+                               3765B4E00F78055000C3EDC5 /* sharedochiai.h */,
+                               3765B4E10F78055000C3EDC5 /* sharedochiai.cpp */,
                                37D928350F21331F001D4494 /* sharedsobs.h */,
                                37D928340F21331F001D4494 /* sharedsobs.cpp */,
                                37AFC71D0F445386005F492D /* sharedsobscollectsummary.h */,
                                A70B53A60F4CD7AD0064797E /* getlabelcommand.cpp */,
                                A70B53A90F4CD7AD0064797E /* getlinecommand.h */,
                                A70B53A80F4CD7AD0064797E /* getlinecommand.cpp */,
+                               3765B5360F7A5A9E00C3EDC5 /* heatmapcommand.h */,
+                               3765B5370F7A5A9E00C3EDC5 /* heatmapcommand.cpp */,
                                37D927E40F21331F001D4494 /* helpcommand.h */,
                                37D927E30F21331F001D4494 /* helpcommand.cpp */,
-                               37D927F30F21331F001D4494 /* nocommand.h */,
-                               37D927F20F21331F001D4494 /* nocommand.cpp */,
+                               374CD63D0F65832000D90B4A /* libshuffcommand.h */,
+                               374CD63E0F65832000D90B4A /* libshuffcommand.cpp */,
+                               3765B4790F77D15900C3EDC5 /* nocommands.h */,
+                               3765B4780F77D15900C3EDC5 /* nocommands.cpp */,
                                37D927FA0F21331F001D4494 /* parselistcommand.h */,
                                37D927F90F21331F001D4494 /* parselistcommand.cpp */,
                                3792946E0F2E191800B9034A /* parsimonycommand.h */,
                                37D9286E0F21331F001D4494 /* listvector.cpp in Sources */,
                                37D9286F0F21331F001D4494 /* mothur.cpp in Sources */,
                                37D928700F21331F001D4494 /* nameassignment.cpp in Sources */,
-                               37D928710F21331F001D4494 /* nocommand.cpp in Sources */,
                                37D928720F21331F001D4494 /* npshannon.cpp in Sources */,
                                37D928730F21331F001D4494 /* ordervector.cpp in Sources */,
                                37D928740F21331F001D4494 /* parselistcommand.cpp in Sources */,
                                A70B53AB0F4CD7AD0064797E /* getlabelcommand.cpp in Sources */,
                                A70B53AC0F4CD7AD0064797E /* getlinecommand.cpp in Sources */,
                                3782163D0F616079008E1F6D /* fullmatrix.cpp in Sources */,
+                               374CD63F0F65832000D90B4A /* libshuffcommand.cpp in Sources */,
+                               374CD6F10F65A4C100D90B4A /* coverage.cpp in Sources */,
+                               3765B47A0F77D15900C3EDC5 /* nocommands.cpp in Sources */,
+                               3765B4E20F78055000C3EDC5 /* sharedochiai.cpp in Sources */,
+                               3765B5160F780A7F00C3EDC5 /* sharedanderberg.cpp in Sources */,
+                               217595330F791EEE001CC3C6 /* sharedkulczynski.cpp in Sources */,
+                               2175953F0F792111001CC3C6 /* sharedkulczynskicody.cpp in Sources */,
+                               217595590F792490001CC3C6 /* sharedlennon.cpp in Sources */,
+                               217595640F7927BB001CC3C6 /* sharedmorisitahorn.cpp in Sources */,
+                               217595710F792A33001CC3C6 /* sharedbraycurtis.cpp in Sources */,
+                               3765B5380F7A5A9E00C3EDC5 /* heatmapcommand.cpp in Sources */,
+                               3765B5460F7A62A000C3EDC5 /* heatmap.cpp in Sources */,
                        );
                        runOnlyForDeploymentPostprocessing = 0;
                };